BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F05SP1|AL425896
(753 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 555 e-158
>3x_Contig1737
Length = 17214
Score = 555 bits (278), Expect = e-158
Identities = 601/711 (84%)
Strand = Plus / Plus
Query: 6 ttctaaactaacttaaaaatatatactaatactaatactatcattaacttcctatattat 65
|||| |||| |||||| | ||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 8046 ttctgaactgacttaagagtatatactaatactaatactatcgttaacttccgatattat 8105
Query: 66 atttcttccttatattttaactaacatatctaatttattcttttttttaaaacccatttt 125
|||||||||||||||| ||||| ||||||||||| ||||||| ||||| |||||||||||
Sbjct: 8106 atttcttccttatattgtaactgacatatctaatgtattcttgtttttgaaacccatttt 8165
Query: 126 ccatccaaaaacttctactattcctacctttaccaattacctacaaacaccctaaccaaa 185
||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||| |
Sbjct: 8166 ccatccaaaggcttctactattcgtacctttaccaattacctacaggcaccgtaaccaga 8225
Query: 186 ttaaatttttttactacttttttaaatacttactattttaaacaactatattattaaama 245
||| || || |||| ||||| ||||||||||||||| | | |||||||||||||||||
Sbjct: 8226 ttagatgttgttacgactttgttaaatacttactatgtgagacaactatattattaaagg 8285
Query: 246 ctccaaaccttaaaacttaataacttccaatttcacaatatttttccttccccccaaatt 305
||| | || ||| ||| |||||||| |||| ||||||||||||||||| ||||| |||
Sbjct: 8286 ctcgagacggtaagactgaataacttgcaatggcacaatatttttccttcgccccagatt 8345
Query: 306 tatcccaaccacaccataacccaaaaaccataaaatatccaaccactaataaccccattt 365
||||| | |||| |||| | |||||||||| | |||||| ||||||||||| |||| |
Sbjct: 8346 tatccgaggcacagcatagcggaaaaaccatagagtatccagccactaataacgccatgt 8405
Query: 366 taccataaccaacccttcccatctcaaaaaactttaataaactcaattccattcacattc 425
||| || |||| ||||||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 8406 tacgatgaccaggccttcccatctcaaagaacttgaataaactcaatgccattcacattc 8465
Query: 426 ctttatcatttaatcccacttttcttttctttccaacaaaaattaaacttaatcaaaaaa 485
||||||||||||||||||| ||| |||||||||| || ||||| | |||||||| || |
Sbjct: 8466 gtttatcatttaatcccactgttcgtttctttccagcagaaattgagcttaatcagaaga 8525
Query: 486 acattaaatacataaaaaacaaaatataaattacaaatatactaaaatccatcattttta 545
|||| | |||||| | |||| ||| ||| ||||| ||||||| |||||||||| |
Sbjct: 8526 acatggagtacatagagaacagaatgtaaggtacaagtatactagaatccatcatgtggg 8585
Query: 546 aataccaccataaaattaaccaatttactacccttccattctcaacctaanaccccatcc 605
|||| ||||||| ||| ||||| |||||| ||||||||||||| ||| |||||||||
Sbjct: 8586 gatacggccataaagttagccaatggactaccgttccattctcaacgtaagaccccatcc 8645
Query: 606 aaaccawacaactgatcyaaaaaaacaattatcctatggcgtcaccttkcttttaactyt 665
|||| | ||| |||||| |||| |||| | ||| ||||| ||||| || ||||||||| |
Sbjct: 8646 aaacgagacagctgatcgaaaagaacagtgatcgtatggggtcacgttgcttttaactgt 8705
Query: 666 ttttatygattttcctbtmaaactctcaaatcccctctaccttattttaat 716
|||||| ||||| ||| | || |||||||||||| ||||||||||||||||
Sbjct: 8706 ttttatggatttgcctgtaaagctctcaaatcccgtctaccttattttaat 8756
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,150
Number of Sequences: 1807
Number of extensions: 10150
Number of successful extensions: 302
Number of sequences better than 1.0e-20: 1
length of query: 753
length of database: 10,358,551
effective HSP length: 16
effective length of query: 737
effective length of database: 10,329,639
effective search space: 7612943943
effective search space used: 7612943943
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)